Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a11P31650 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a11P31650 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a11P31650 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a11P31650 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a11P31650 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a11P31650 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Slc6a11P31650 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a11P31650 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Slc6a11P31650 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13□□□□□ -0.33
Slc6a11P31650 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Slc6a11P31650 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13□□□□□ -0.33
Slc6a11P31650 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slc6a11P31650 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Gm28631-201ENSMUST00000190740 334 ntBASIC13□□□□□ -0.33
Slc6a11P31650 Gm43433-201ENSMUST00000196573 481 ntBASIC13□□□□□ -0.33
Slc6a11P31650 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13□□□□□ -0.33
Slc6a11P31650 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13□□□□□ -0.33
Slc6a11P31650 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Slc6a11P31650 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a11P31650 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.99□□□□□ -0.33
Slc6a11P31650 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.99□□□□□ -0.33
Slc6a11P31650 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.99□□□□□ -0.33
Slc6a11P31650 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a11P31650 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a11P31650 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms