Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Col8a2P25318 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.41□□□□□ -0.58
Col8a2P25318 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col8a2P25318 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col8a2P25318 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.4□□□□□ -0.58
Col8a2P25318 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.4□□□□□ -0.58
Col8a2P25318 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Gm15429-201ENSMUST00000151268 798 ntBASIC11.4□□□□□ -0.58
Col8a2P25318 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col8a2P25318 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col8a2P25318 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.4□□□□□ -0.58
Col8a2P25318 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Col8a2P25318 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col8a2P25318 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col8a2P25318 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col8a2P25318 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col8a2P25318 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col8a2P25318 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col8a2P25318 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col8a2P25318 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Col8a2P25318 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.39□□□□□ -0.59
Col8a2P25318 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.39□□□□□ -0.59
Col8a2P25318 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col8a2P25318 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.39□□□□□ -0.59
Col8a2P25318 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.39□□□□□ -0.59
Col8a2P25318 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.39□□□□□ -0.59
Col8a2P25318 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col8a2P25318 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.39□□□□□ -0.59
Col8a2P25318 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.39□□□□□ -0.59
Col8a2P25318 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Col8a2P25318 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Col8a2P25318 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col8a2P25318 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.38□□□□□ -0.59
Col8a2P25318 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.38□□□□□ -0.59
Col8a2P25318 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms