Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.67□□□□□ -0.38
Tnfrsf1bP25119 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tnfrsf1bP25119 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tnfrsf1bP25119 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf1bP25119 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf1bP25119 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfrsf1bP25119 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm43094-201ENSMUST00000196549 921 ntBASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm44719-201ENSMUST00000206404 149 ntBASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfrsf1bP25119 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfrsf1bP25119 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.65□□□□□ -0.39
Tnfrsf1bP25119 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfrsf1bP25119 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms