Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Mir8109-201ENSMUST00000184375 117 ntBASIC14.03□□□□□ -0.16
Hoxd8P23463 Gm43133-201ENSMUST00000197472 463 ntBASIC14.03□□□□□ -0.16
Hoxd8P23463 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxd8P23463 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxd8P23463 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.03□□□□□ -0.16
Hoxd8P23463 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Hoxd8P23463 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Hoxd8P23463 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hoxd8P23463 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.03□□□□□ -0.16
Hoxd8P23463 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxd8P23463 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Hoxd8P23463 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.02□□□□□ -0.16
Hoxd8P23463 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxd8P23463 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Gm15236-201ENSMUST00000117309 379 ntBASIC14.02□□□□□ -0.17
Hoxd8P23463 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Gm27501-201ENSMUST00000183599 107 ntBASIC14.02□□□□□ -0.17
Hoxd8P23463 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Gm42627-201ENSMUST00000197347 224 ntBASIC14.02□□□□□ -0.17
Hoxd8P23463 Gm45930-201ENSMUST00000221330 292 ntBASIC14.02□□□□□ -0.17
Hoxd8P23463 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.02□□□□□ -0.17
Hoxd8P23463 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hoxd8P23463 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxd8P23463 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxd8P23463 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxd8P23463 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxd8P23463 Gm11793-201ENSMUST00000120433 981 ntBASIC14.01□□□□□ -0.17
Hoxd8P23463 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Gm16379-201ENSMUST00000161469 348 ntBASIC14.01□□□□□ -0.17
Hoxd8P23463 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Gm8762-201ENSMUST00000193486 339 ntBASIC14.01□□□□□ -0.17
Hoxd8P23463 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.01□□□□□ -0.17
Hoxd8P23463 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.01□□□□□ -0.17
Hoxd8P23463 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.01□□□□□ -0.17
Hoxd8P23463 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.01□□□□□ -0.17
Hoxd8P23463 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxd8P23463 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxd8P23463 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxd8P23463 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxd8P23463 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms