Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Gm24543-201ENSMUST00000103867 82 ntBASIC12.17□□□□□ -0.46
P20040 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
P20040 Gm13453-201ENSMUST00000118708 357 ntBASIC12.17□□□□□ -0.46
P20040 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
P20040 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.17□□□□□ -0.46
P20040 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.17□□□□□ -0.46
P20040 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
P20040 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.17□□□□□ -0.46
P20040 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.17□□□□□ -0.46
P20040 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P20040 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
P20040 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P20040 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P20040 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P20040 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
P20040 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.16□□□□□ -0.46
P20040 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
P20040 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.16□□□□□ -0.46
P20040 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.16□□□□□ -0.46
P20040 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
P20040 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.16□□□□□ -0.46
P20040 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.16□□□□□ -0.46
P20040 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
P20040 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
P20040 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.16□□□□□ -0.46
P20040 Gm6888-201ENSMUST00000221983 706 ntBASIC12.16□□□□□ -0.46
P20040 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.16□□□□□ -0.46
P20040 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.16□□□□□ -0.46
P20040 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
P20040 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
P20040 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
P20040 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P20040 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
P20040 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
P20040 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.15□□□□□ -0.46
P20040 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
P20040 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
P20040 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms