Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.8■□□□□ 0.12
Col1a1P11087 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.8■□□□□ 0.12
Col1a1P11087 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Col1a1P11087 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Col1a1P11087 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col1a1P11087 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col1a1P11087 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col1a1P11087 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.8■□□□□ 0.12
Col1a1P11087 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col1a1P11087 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.79■□□□□ 0.12
Col1a1P11087 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.79■□□□□ 0.12
Col1a1P11087 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col1a1P11087 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col1a1P11087 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col1a1P11087 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Col1a1P11087 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.79■□□□□ 0.12
Col1a1P11087 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.79■□□□□ 0.12
Col1a1P11087 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.79■□□□□ 0.12
Col1a1P11087 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.79■□□□□ 0.12
Col1a1P11087 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col1a1P11087 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col1a1P11087 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Gm12176-201ENSMUST00000121420 875 ntBASIC15.78■□□□□ 0.12
Col1a1P11087 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.78■□□□□ 0.12
Col1a1P11087 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Gm24990-201ENSMUST00000157406 323 ntBASIC15.78■□□□□ 0.12
Col1a1P11087 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.78■□□□□ 0.12
Col1a1P11087 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Col1a1P11087 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.78■□□□□ 0.12
Col1a1P11087 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Gm13316-201ENSMUST00000140537 691 ntBASIC15.78■□□□□ 0.12
Col1a1P11087 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.78■□□□□ 0.12
Col1a1P11087 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.78■□□□□ 0.12
Col1a1P11087 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col1a1P11087 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Col1a1P11087 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col1a1P11087 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Col1a1P11087 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Col1a1P11087 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms