Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04946 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04946 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P04946 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.69□□□□□ -0.54
P04946 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.69□□□□□ -0.54
P04946 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P04946 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P04946 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.69□□□□□ -0.54
P04946 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.69□□□□□ -0.54
P04946 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.69□□□□□ -0.54
P04946 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.69□□□□□ -0.54
P04946 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P04946 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.69□□□□□ -0.54
P04946 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.69□□□□□ -0.54
P04946 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.69□□□□□ -0.54
P04946 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.69□□□□□ -0.54
P04946 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.69□□□□□ -0.54
P04946 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
P04946 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.69□□□□□ -0.54
P04946 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P04946 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P04946 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.69□□□□□ -0.54
P04946 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04946 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04946 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
P04946 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.68□□□□□ -0.54
P04946 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04946 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P04946 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.68□□□□□ -0.54
P04946 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.68□□□□□ -0.54
P04946 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04946 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.68□□□□□ -0.54
P04946 Gm29649-201ENSMUST00000185649 419 ntBASIC11.68□□□□□ -0.54
P04946 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.68□□□□□ -0.54
P04946 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.68□□□□□ -0.54
P04946 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.68□□□□□ -0.54
P04946 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Gm6091-201ENSMUST00000098307 165 ntBASIC11.68□□□□□ -0.54
P04946 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.68□□□□□ -0.54
P04946 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
P04946 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04946 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.68□□□□□ -0.54
P04946 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.68□□□□□ -0.54
P04946 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04946 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
P04946 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
P04946 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
P04946 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P04946 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04946 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04946 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04946 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04946 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.67□□□□□ -0.54
P04946 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04946 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms