Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubr1O70481 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ubr1O70481 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubr1O70481 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubr1O70481 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubr1O70481 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubr1O70481 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.38■□□□□ 0.37
Ubr1O70481 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.38■□□□□ 0.37
Ubr1O70481 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Ubr1O70481 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ubr1O70481 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.38■□□□□ 0.37
Ubr1O70481 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ubr1O70481 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.38■□□□□ 0.37
Ubr1O70481 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubr1O70481 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ubr1O70481 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.38■□□□□ 0.37
Ubr1O70481 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Ubr1O70481 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ubr1O70481 Gm45186-201ENSMUST00000206874 478 ntBASIC17.38■□□□□ 0.37
Ubr1O70481 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC17.38■□□□□ 0.37
Ubr1O70481 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.38■□□□□ 0.37
Ubr1O70481 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ubr1O70481 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ubr1O70481 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.37■□□□□ 0.37
Ubr1O70481 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubr1O70481 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ubr1O70481 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubr1O70481 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubr1O70481 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.37■□□□□ 0.37
Ubr1O70481 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.37■□□□□ 0.37
Ubr1O70481 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC17.37■□□□□ 0.37
Ubr1O70481 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ubr1O70481 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.37■□□□□ 0.37
Ubr1O70481 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubr1O70481 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ubr1O70481 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubr1O70481 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.37■□□□□ 0.37
Ubr1O70481 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubr1O70481 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.36■□□□□ 0.37
Ubr1O70481 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.36■□□□□ 0.37
Ubr1O70481 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ubr1O70481 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.36■□□□□ 0.37
Ubr1O70481 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Gm19221-201ENSMUST00000221827 1477 ntBASIC17.36■□□□□ 0.37
Ubr1O70481 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.36■□□□□ 0.37
Ubr1O70481 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ubr1O70481 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ubr1O70481 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr1O70481 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ubr1O70481 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.35■□□□□ 0.37
Ubr1O70481 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Gm10434-201ENSMUST00000101158 471 ntBASIC17.35■□□□□ 0.37
Ubr1O70481 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.35■□□□□ 0.37
Ubr1O70481 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ubr1O70481 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Ubr1O70481 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.35■□□□□ 0.37
Ubr1O70481 Gm17208-201ENSMUST00000168388 535 ntBASIC17.35■□□□□ 0.37
Ubr1O70481 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.35■□□□□ 0.37
Ubr1O70481 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms