Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Gm22331-201ENSMUST00000158066 136 ntBASIC17.32■□□□□ 0.36
ScaperF8VQ70 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Gm38002-201ENSMUST00000193255 180 ntBASIC17.32■□□□□ 0.36
ScaperF8VQ70 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
ScaperF8VQ70 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.32■□□□□ 0.36
ScaperF8VQ70 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ScaperF8VQ70 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Gm37466-201ENSMUST00000195692 652 ntBASIC17.31■□□□□ 0.36
ScaperF8VQ70 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.31■□□□□ 0.36
ScaperF8VQ70 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ScaperF8VQ70 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm13385-201ENSMUST00000121089 220 ntBASIC17.3■□□□□ 0.36
ScaperF8VQ70 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm7783-201ENSMUST00000204795 781 ntBASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm18473-201ENSMUST00000220543 868 ntBASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm8598-201ENSMUST00000221184 836 ntBASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm24526-201ENSMUST00000082921 158 ntBASIC17.3■□□□□ 0.36
ScaperF8VQ70 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ScaperF8VQ70 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Gm27772-201ENSMUST00000184900 187 ntBASIC17.29■□□□□ 0.36
ScaperF8VQ70 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.29■□□□□ 0.36
ScaperF8VQ70 Gm19309-201ENSMUST00000218295 205 ntBASIC17.29■□□□□ 0.36
ScaperF8VQ70 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.29■□□□□ 0.36
ScaperF8VQ70 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
ScaperF8VQ70 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.29■□□□□ 0.36
ScaperF8VQ70 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ScaperF8VQ70 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms