Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gm22018-201ENSMUST00000104357 131 ntBASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gm44069-201ENSMUST00000204898 506 ntBASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gm45880-201ENSMUST00000213041 853 ntBASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.34■□□□□ 0.21
Ube4aE9Q735 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gm10146-201ENSMUST00000072739 309 ntBASIC16.34■□□□□ 0.21
Ube4aE9Q735 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.34■□□□□ 0.21
Ube4aE9Q735 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4aE9Q735 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4aE9Q735 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4aE9Q735 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ube4aE9Q735 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4aE9Q735 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4aE9Q735 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.33■□□□□ 0.21
Ube4aE9Q735 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Ube4aE9Q735 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm6447-201ENSMUST00000118905 835 ntBASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm13123-201ENSMUST00000122173 492 ntBASIC16.33■□□□□ 0.2
Ube4aE9Q735 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm7029-201ENSMUST00000173226 450 ntBASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.33■□□□□ 0.2
Ube4aE9Q735 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm43179-201ENSMUST00000198797 275 ntBASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.33■□□□□ 0.2
Ube4aE9Q735 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ube4aE9Q735 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.32■□□□□ 0.2
Ube4aE9Q735 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Gm38002-201ENSMUST00000193255 180 ntBASIC16.32■□□□□ 0.2
Ube4aE9Q735 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.32■□□□□ 0.2
Ube4aE9Q735 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4aE9Q735 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms