Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm10782-202ENSMUST00000223775 1480 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
ApobE9Q414 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
ApobE9Q414 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm11930-201ENSMUST00000117788 190 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm9540-201ENSMUST00000188230 478 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.11□□□□□ -1.11
ApobE9Q414 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
ApobE9Q414 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Gm14109-201ENSMUST00000118814 309 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Gm16481-201ENSMUST00000119074 1227 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm10109-202ENSMUST00000206890 1211 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm11331-201ENSMUST00000119764 288 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Gm14704-201ENSMUST00000120300 874 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Gm23699-201ENSMUST00000158835 135 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm25700-201ENSMUST00000177693 110 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Mir6927-201ENSMUST00000184494 71 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm28386-201ENSMUST00000189147 1849 ntBASIC8.11□□□□□ -1.11
ApobE9Q414 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
ApobE9Q414 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ApobE9Q414 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Gm14130-201ENSMUST00000118417 987 ntBASIC8.1□□□□□ -1.11
ApobE9Q414 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
ApobE9Q414 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
ApobE9Q414 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 AC124392.1-201ENSMUST00000225172 5324 ntBASIC8.1□□□□□ -1.11
ApobE9Q414 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
ApobE9Q414 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.1□□□□□ -1.11
ApobE9Q414 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
ApobE9Q414 Gm12015-201ENSMUST00000117065 843 ntBASIC8.1□□□□□ -1.11
ApobE9Q414 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Gm27023-201ENSMUST00000182372 285 ntBASIC8.1□□□□□ -1.11
ApobE9Q414 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ApobE9Q414 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms