Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.52□□□□□ -0.57
Col6a4A2AX52 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.52□□□□□ -0.57
Col6a4A2AX52 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.52□□□□□ -0.57
Col6a4A2AX52 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.52□□□□□ -0.57
Col6a4A2AX52 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Gm4271-201ENSMUST00000174444 973 ntBASIC11.52□□□□□ -0.57
Col6a4A2AX52 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Gm18935-201ENSMUST00000212692 664 ntBASIC11.52□□□□□ -0.57
Col6a4A2AX52 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.52□□□□□ -0.57
Col6a4A2AX52 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col6a4A2AX52 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.51□□□□□ -0.57
Col6a4A2AX52 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms