Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.42□□□□□ -0.58
Trav12-1A0N8R1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm22065-201ENSMUST00000103753 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm22066-201ENSMUST00000103761 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24932-201ENSMUST00000103763 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24115-201ENSMUST00000103799 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm22190-201ENSMUST00000103827 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm22191-201ENSMUST00000103831 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24721-201ENSMUST00000103849 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm28018-201ENSMUST00000103869 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm26399-201ENSMUST00000103937 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm25349-201ENSMUST00000177728 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm23616-201ENSMUST00000177797 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm25871-201ENSMUST00000177816 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24752-201ENSMUST00000178240 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24496-201ENSMUST00000178287 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm25649-201ENSMUST00000178476 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm25548-201ENSMUST00000178681 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm23147-201ENSMUST00000178841 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm26095-201ENSMUST00000179270 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm22171-201ENSMUST00000179283 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm23936-201ENSMUST00000179354 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm22619-201ENSMUST00000179516 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm25255-201ENSMUST00000179579 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24755-201ENSMUST00000179691 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm26506-201ENSMUST00000179692 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm25086-201ENSMUST00000179931 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm23243-201ENSMUST00000180047 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24659-201ENSMUST00000180212 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm24169-201ENSMUST00000180244 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm23689-201ENSMUST00000180354 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm27359-201ENSMUST00000184153 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm27785-201ENSMUST00000184268 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm27466-201ENSMUST00000184396 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm27703-201ENSMUST00000184836 110 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav12-1A0N8R1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms