Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc112A0AUP1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm11594-201ENSMUST00000122313 162 ntBASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm24513-201ENSMUST00000174964 138 ntBASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm8927-201ENSMUST00000181978 981 ntBASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm27397-201ENSMUST00000184997 107 ntBASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Gm3222-201ENSMUST00000071282 990 ntBASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc112A0AUP1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms