Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Mir449b-201ENSMUST00000104833 80 ntBASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Gm15460-201ENSMUST00000118147 391 ntBASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Gm25925-201ENSMUST00000158314 306 ntBASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Chchd1-203ENSMUST00000224633 557 ntBASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc194A0A140LIT1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Gm21470-201ENSMUST00000187680 696 ntBASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Mir497b-201ENSMUST00000093601 125 ntBASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc194A0A140LIT1 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm28630-201ENSMUST00000187806 498 ntBASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm9229-201ENSMUST00000222777 126 ntBASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc194A0A140LIT1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms