Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.51□□□□□ -0.73
PdfS4R2K0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.51□□□□□ -0.73
PdfS4R2K0 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.51□□□□□ -0.73
PdfS4R2K0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.51□□□□□ -0.73
PdfS4R2K0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
PdfS4R2K0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
PdfS4R2K0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.5□□□□□ -0.73
PdfS4R2K0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.5□□□□□ -0.73
PdfS4R2K0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.5□□□□□ -0.73
PdfS4R2K0 Gm27702-201ENSMUST00000184512 56 ntBASIC10.5□□□□□ -0.73
PdfS4R2K0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.5□□□□□ -0.73
PdfS4R2K0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.5□□□□□ -0.73
PdfS4R2K0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
PdfS4R2K0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gm10175-201ENSMUST00000086013 645 ntBASIC10.5□□□□□ -0.73
PdfS4R2K0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.5□□□□□ -0.73
PdfS4R2K0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.5□□□□□ -0.73
PdfS4R2K0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
PdfS4R2K0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.5□□□□□ -0.73
PdfS4R2K0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.5□□□□□ -0.73
PdfS4R2K0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
PdfS4R2K0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
PdfS4R2K0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms