Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atp6ap1Q9R1Q9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atp6ap1Q9R1Q9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atp6ap1Q9R1Q9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atp6ap1Q9R1Q9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm16215-201ENSMUST00000161990 637 ntBASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atp6ap1Q9R1Q9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Atp6ap1Q9R1Q9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Atp6ap1Q9R1Q9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm27772-201ENSMUST00000184900 187 ntBASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.39□□□□□ -0.27
Atp6ap1Q9R1Q9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms