Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Gm4804-201ENSMUST00000182234 999 ntBASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Gm5425-201ENSMUST00000214125 459 ntBASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clcf1Q9QZM3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Gm11424-201ENSMUST00000121929 829 ntBASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Gm37714-201ENSMUST00000194742 342 ntBASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clcf1Q9QZM3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Gm28631-201ENSMUST00000190740 334 ntBASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Gm18027-201ENSMUST00000218947 619 ntBASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.43□□□□□ -0.42
Clcf1Q9QZM3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clcf1Q9QZM3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms