Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Mir6392-201ENSMUST00000184924 108 ntBASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Mir7654-201ENSMUST00000185082 70 ntBASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm45668-201ENSMUST00000211271 493 ntBASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm15823-201ENSMUST00000064305 670 ntBASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3aQ9JKX8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3aQ9JKX8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Upk3aQ9JKX8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Upk3aQ9JKX8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Upk3aQ9JKX8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk3aQ9JKX8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms