Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ube4bQ9ES00 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.13□□□□□ -0.31
Ube4bQ9ES00 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ube4bQ9ES00 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.12□□□□□ -0.31
Ube4bQ9ES00 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ube4bQ9ES00 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms