Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3a3Q9D554 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.84□□□□□ -0.19
Sf3a3Q9D554 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3a3Q9D554 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.83□□□□□ -0.19
Sf3a3Q9D554 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3a3Q9D554 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3a3Q9D554 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3a3Q9D554 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3a3Q9D554 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Gm10154-201ENSMUST00000084445 354 ntBASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3a3Q9D554 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms