Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem88Q9D0N8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Gm8655-201ENSMUST00000221159 852 ntBASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem88Q9D0N8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms