Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CYI0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CYI0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CYI0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.15■□□□□ 0.02
Q9CYI0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CYI0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CYI0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CYI0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.14■□□□□ 0.01
Q9CYI0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Q9CYI0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.14■□□□□ 0.01
Q9CYI0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.14■□□□□ 0.01
Q9CYI0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
Q9CYI0 Gm17794-201ENSMUST00000220252 955 ntBASIC15.14■□□□□ 0.01
Q9CYI0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Q9CYI0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.14■□□□□ 0.01
Q9CYI0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.14■□□□□ 0.01
Q9CYI0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CYI0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.13■□□□□ 0.01
Q9CYI0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.13■□□□□ 0.01
Q9CYI0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Q9CYI0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.13■□□□□ 0.01
Q9CYI0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.13■□□□□ 0.01
Q9CYI0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CYI0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.12■□□□□ 0.01
Q9CYI0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Q9CYI0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Q9CYI0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.12■□□□□ 0.01
Q9CYI0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.12■□□□□ 0.01
Q9CYI0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Mir1894-201ENSMUST00000122802 81 ntBASIC15.12■□□□□ 0.01
Q9CYI0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.12■□□□□ 0.01
Q9CYI0 Gm6244-201ENSMUST00000178732 841 ntBASIC15.12■□□□□ 0.01
Q9CYI0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Q9CYI0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.12■□□□□ 0.01
Q9CYI0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Q9CYI0 Gm5356-201ENSMUST00000093326 615 ntBASIC15.12■□□□□ 0.01
Q9CYI0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.12■□□□□ 0.01
Q9CYI0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.12■□□□□ 0.01
Q9CYI0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms