Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim13Q9CYB0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim13Q9CYB0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim13Q9CYB0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim13Q9CYB0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim13Q9CYB0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim13Q9CYB0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim13Q9CYB0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.65□□□□□ -0.38
Trim13Q9CYB0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim13Q9CYB0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim13Q9CYB0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Gm6973-201ENSMUST00000117080 721 ntBASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Gm11543-201ENSMUST00000120758 370 ntBASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim13Q9CYB0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.62□□□□□ -0.39
Trim13Q9CYB0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms