Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Gm7003-201ENSMUST00000195089 312 ntBASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh23Q99PF4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.62□□□□□ -0.23
Cdh23Q99PF4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm19459-201ENSMUST00000176240 835 ntBASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.62□□□□□ -0.23
Cdh23Q99PF4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm5369-201ENSMUST00000217499 588 ntBASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdh23Q99PF4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.61□□□□□ -0.23
Cdh23Q99PF4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm26956-201ENSMUST00000182176 986 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm32025-201ENSMUST00000217960 307 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh23Q99PF4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms