Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gm15321-201ENSMUST00000121290 288 ntBASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC17.78■□□□□ 0.44
Rtn4Q99P72 AC133598.4-201ENSMUST00000224577 454 ntBASIC17.78■□□□□ 0.44
Rtn4Q99P72 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4Q99P72 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Gm12859-201ENSMUST00000117834 427 ntBASIC17.77■□□□□ 0.44
Rtn4Q99P72 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Gm3650-201ENSMUST00000180600 747 ntBASIC17.77■□□□□ 0.44
Rtn4Q99P72 Gm28941-201ENSMUST00000185536 1017 ntBASIC17.77■□□□□ 0.44
Rtn4Q99P72 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.77■□□□□ 0.44
Rtn4Q99P72 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.77■□□□□ 0.44
Rtn4Q99P72 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4Q99P72 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC17.77■□□□□ 0.43
Rtn4Q99P72 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.76■□□□□ 0.43
Rtn4Q99P72 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4Q99P72 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms