Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gm27320-201ENSMUST00000184892 109 ntBASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gm29741-201ENSMUST00000192667 421 ntBASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx6-1Q99MA9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Gm29396-201ENSMUST00000185659 716 ntBASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx6-1Q99MA9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms