Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Gm15393-201ENSMUST00000120499 219 ntBASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Gm25925-201ENSMUST00000158314 306 ntBASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Mir497b-201ENSMUST00000093601 125 ntBASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps39Q8R5L3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gm37935-201ENSMUST00000192012 982 ntBASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gm5425-201ENSMUST00000214125 459 ntBASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps39Q8R5L3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vps39Q8R5L3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.71□□□□□ -0.21
Vps39Q8R5L3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps39Q8R5L3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms