Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.66■□□□□ 0.1
Trim29Q8R2Q0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Gm27306-201ENSMUST00000183970 107 ntBASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim29Q8R2Q0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim29Q8R2Q0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim29Q8R2Q0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms