Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm13823-201ENSMUST00000119930 345 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Psmb5-202ENSMUST00000227257 622 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nudcd3Q8R1N4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Gm18027-201ENSMUST00000218947 619 ntBASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nudcd3Q8R1N4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Gm2810-201ENSMUST00000118681 990 ntBASIC13.66□□□□□ -0.22
Nudcd3Q8R1N4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms