Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Gm12859-201ENSMUST00000117834 427 ntBASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Gm44719-201ENSMUST00000206404 149 ntBASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sf3a1Q8K4Z5 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Gm5354-201ENSMUST00000182417 973 ntBASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Gm27772-201ENSMUST00000184900 187 ntBASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Gm28631-201ENSMUST00000190740 334 ntBASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sf3a1Q8K4Z5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sf3a1Q8K4Z5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sf3a1Q8K4Z5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms