Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.93□□□□□ -0.34
Clrn1Q8K445 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.93□□□□□ -0.34
Clrn1Q8K445 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.93□□□□□ -0.34
Clrn1Q8K445 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn1Q8K445 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Clrn1Q8K445 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm6912-201ENSMUST00000117218 544 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm14719-201ENSMUST00000121891 340 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm24420-201ENSMUST00000176676 59 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 Auts2-212ENSMUST00000178555 309 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Clrn1Q8K445 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.92□□□□□ -0.34
Clrn1Q8K445 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn1Q8K445 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.91□□□□□ -0.34
Clrn1Q8K445 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.91□□□□□ -0.34
Clrn1Q8K445 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm29667-201ENSMUST00000190817 490 ntBASIC12.91□□□□□ -0.34
Clrn1Q8K445 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm17795-201ENSMUST00000214505 757 ntBASIC12.91□□□□□ -0.34
Clrn1Q8K445 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.91□□□□□ -0.34
Clrn1Q8K445 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms