Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lin28aQ8K3Y3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Gm19078-201ENSMUST00000206311 727 ntBASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lin28aQ8K3Y3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Mir7654-201ENSMUST00000185082 70 ntBASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lin28aQ8K3Y3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms