Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC8.62□□□□□ -1.03
Cystm1Q8K353 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Gm37269-201ENSMUST00000193906 1891 ntBASIC8.62□□□□□ -1.03
Cystm1Q8K353 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cystm1Q8K353 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gm23935-201ENSMUST00000102303 57 ntBASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gm24270-201ENSMUST00000102326 57 ntBASIC8.61□□□□□ -1.03
Cystm1Q8K353 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gm15920-201ENSMUST00000118998 402 ntBASIC8.61□□□□□ -1.03
Cystm1Q8K353 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Mir1895-201ENSMUST00000122615 79 ntBASIC8.61□□□□□ -1.03
Cystm1Q8K353 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gm24245-201ENSMUST00000157318 57 ntBASIC8.61□□□□□ -1.03
Cystm1Q8K353 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC8.61□□□□□ -1.03
Cystm1Q8K353 AC151286.1-201ENSMUST00000198489 145 ntBASIC8.61□□□□□ -1.03
Cystm1Q8K353 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cystm1Q8K353 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cystm1Q8K353 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cystm1Q8K353 CT009757.3-201ENSMUST00000223367 2320 ntBASIC8.6□□□□□ -1.03
Cystm1Q8K353 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Cystm1Q8K353 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cystm1Q8K353 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cystm1Q8K353 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cystm1Q8K353 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms