Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Gm3436-201ENSMUST00000179930 840 ntBASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cchcr1Q8K2I2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cchcr1Q8K2I2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.21■□□□□ 0.18
Cchcr1Q8K2I2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cchcr1Q8K2I2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cchcr1Q8K2I2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cchcr1Q8K2I2 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.21■□□□□ 0.18
Cchcr1Q8K2I2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Gm24420-201ENSMUST00000176676 59 ntBASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.2■□□□□ 0.18
Cchcr1Q8K2I2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Gm25948-201ENSMUST00000175334 112 ntBASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cchcr1Q8K2I2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms