Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Gm16479-201ENSMUST00000121706 932 ntBASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Gm25732-201ENSMUST00000175168 60 ntBASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Gm7467-201ENSMUST00000185173 652 ntBASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zc3h3Q8CHP0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm14208-201ENSMUST00000119645 678 ntBASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm13316-201ENSMUST00000140537 691 ntBASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm26185-201ENSMUST00000157692 266 ntBASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm28450-201ENSMUST00000187349 638 ntBASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm4768-201ENSMUST00000206199 686 ntBASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zc3h3Q8CHP0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Gm12363-201ENSMUST00000122250 668 ntBASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zc3h3Q8CHP0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms