Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.94■□□□□ 0.3
Smc5Q8CG46 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Gm27533-201ENSMUST00000183800 152 ntBASIC16.94■□□□□ 0.3
Smc5Q8CG46 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Gm5779-201ENSMUST00000218467 910 ntBASIC16.94■□□□□ 0.3
Smc5Q8CG46 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc5Q8CG46 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.94■□□□□ 0.3
Smc5Q8CG46 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Gm15653-201ENSMUST00000119247 907 ntBASIC16.93■□□□□ 0.3
Smc5Q8CG46 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.93■□□□□ 0.3
Smc5Q8CG46 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smc5Q8CG46 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.92■□□□□ 0.3
Smc5Q8CG46 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Gm24158-201ENSMUST00000175263 71 ntBASIC16.92■□□□□ 0.3
Smc5Q8CG46 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smc5Q8CG46 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smc5Q8CG46 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Gm6415-201ENSMUST00000118488 348 ntBASIC16.91■□□□□ 0.3
Smc5Q8CG46 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.91■□□□□ 0.3
Smc5Q8CG46 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.91■□□□□ 0.3
Smc5Q8CG46 Gm10766-202ENSMUST00000194123 606 ntBASIC16.91■□□□□ 0.3
Smc5Q8CG46 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.91■□□□□ 0.3
Smc5Q8CG46 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms