Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf31Q8CCF0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gm8602-201ENSMUST00000184045 607 ntBASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gm5035-201ENSMUST00000215581 927 ntBASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gm24447-201ENSMUST00000083977 338 ntBASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf31Q8CCF0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf31Q8CCF0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf31Q8CCF0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Prpf31Q8CCF0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Prpf31Q8CCF0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf31Q8CCF0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Prpf31Q8CCF0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Gm27892-201ENSMUST00000185017 106 ntBASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf31Q8CCF0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms