Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr284-202ENSMUST00000206647 966 ntBASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.33□□□□□ -0.43
Col6a6Q8C6K9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col6a6Q8C6K9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Gm29396-201ENSMUST00000185659 716 ntBASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Gm38144-201ENSMUST00000192790 465 ntBASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Gm38266-201ENSMUST00000194931 421 ntBASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a6Q8C6K9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Gm18935-201ENSMUST00000212692 664 ntBASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a6Q8C6K9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm38158-201ENSMUST00000194617 339 ntBASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a6Q8C6K9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms