Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Gm19078-201ENSMUST00000206311 727 ntBASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc60Q8C4J0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc60Q8C4J0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.46■□□□□ 0.38
Ccdc60Q8C4J0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc60Q8C4J0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Gm15770-201ENSMUST00000117498 584 ntBASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc60Q8C4J0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms