Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Gm15429-201ENSMUST00000151268 798 ntBASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Gm2495-201ENSMUST00000191160 466 ntBASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Trim47Q8C0E3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Gm19087-201ENSMUST00000191430 946 ntBASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim47Q8C0E3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Gm11478-201ENSMUST00000117851 599 ntBASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Gm43930-201ENSMUST00000203868 845 ntBASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.14■□□□□ 0.01
Trim47Q8C0E3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim47Q8C0E3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Gm15770-201ENSMUST00000117498 584 ntBASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms