Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm29269-201ENSMUST00000190087 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm21722-201ENSMUST00000190153 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm28423-201ENSMUST00000190701 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm21899-201ENSMUST00000190745 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm21910-201ENSMUST00000191163 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm21849-201ENSMUST00000191571 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm28678-201ENSMUST00000191593 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm20910-201ENSMUST00000193268 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm21871-201ENSMUST00000194621 696 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm11Q8BUV6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gm15427-201ENSMUST00000117288 531 ntBASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gm37293-201ENSMUST00000191658 295 ntBASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gm44387-201ENSMUST00000196298 145 ntBASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lsm11Q8BUV6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Lsm11Q8BUV6 BC001981-202ENSMUST00000191393 1545 ntBASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Gm11543-201ENSMUST00000120758 370 ntBASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm11Q8BUV6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms