Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Gm6916-202ENSMUST00000205523 195 ntBASIC13.25□□□□□ -0.29
Cpne3Q8BT60 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.25□□□□□ -0.29
Cpne3Q8BT60 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne3Q8BT60 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Gm24543-201ENSMUST00000103867 82 ntBASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Chchd1-203ENSMUST00000224633 557 ntBASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne3Q8BT60 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Gm2756-201ENSMUST00000195851 400 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms