Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sfr1Q8BP27 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sfr1Q8BP27 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sfr1Q8BP27 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sfr1Q8BP27 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sfr1Q8BP27 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sfr1Q8BP27 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.98□□□□□ -0.17
Sfr1Q8BP27 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sfr1Q8BP27 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Mir497b-201ENSMUST00000093601 125 ntBASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Sfr1Q8BP27 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Syt7-205ENSMUST00000224135 1557 ntBASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sfr1Q8BP27 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms