Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Gm13665-201ENSMUST00000120830 528 ntBASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Gm7809-201ENSMUST00000153199 742 ntBASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Gm5070-201ENSMUST00000177599 862 ntBASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smg1Q8BKX6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Gm8712-201ENSMUST00000221090 701 ntBASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smg1Q8BKX6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms