Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Gm5035-201ENSMUST00000215581 927 ntBASIC13.12□□□□□ -0.31
SynbQ8BI41 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.12□□□□□ -0.31
SynbQ8BI41 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.12□□□□□ -0.31
SynbQ8BI41 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SynbQ8BI41 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynbQ8BI41 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SynbQ8BI41 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SynbQ8BI41 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.11□□□□□ -0.31
SynbQ8BI41 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.11□□□□□ -0.31
SynbQ8BI41 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.11□□□□□ -0.31
SynbQ8BI41 Gm28911-201ENSMUST00000188837 117 ntBASIC13.11□□□□□ -0.31
SynbQ8BI41 AY702102-202ENSMUST00000194651 1173 ntBASIC13.11□□□□□ -0.31
SynbQ8BI41 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SynbQ8BI41 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.11□□□□□ -0.31
SynbQ8BI41 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.11□□□□□ -0.31
SynbQ8BI41 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynbQ8BI41 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SynbQ8BI41 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SynbQ8BI41 Gm12341-201ENSMUST00000119724 503 ntBASIC13.1□□□□□ -0.31
SynbQ8BI41 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.1□□□□□ -0.31
SynbQ8BI41 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.1□□□□□ -0.31
SynbQ8BI41 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms