Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.24□□□□□ -0.29
Rnf38Q8BI21 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.23□□□□□ -0.29
Rnf38Q8BI21 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Gm6916-202ENSMUST00000205523 195 ntBASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf38Q8BI21 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Gm25927-201ENSMUST00000175058 117 ntBASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Dupd1-202ENSMUST00000224735 548 ntBASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms