Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm27321-201ENSMUST00000185021 205 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm17837-201ENSMUST00000186435 985 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm37714-201ENSMUST00000194742 342 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn3Q8BHH8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Gm15460-201ENSMUST00000118147 391 ntBASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Gm4804-201ENSMUST00000182234 999 ntBASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn3Q8BHH8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Clrn3Q8BHH8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Clrn3Q8BHH8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clrn3Q8BHH8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clrn3Q8BHH8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms