Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ttc28Q80XJ3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Gm11439-201ENSMUST00000118598 409 ntBASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Gm11637-201ENSMUST00000120601 592 ntBASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ttc28Q80XJ3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Gm2445-201ENSMUST00000182798 989 ntBASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.41□□□□□ -0.58
Ttc28Q80XJ3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms