Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.52□□□□□ -0.57
Rif1Q6PR54 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Gm10146-201ENSMUST00000072739 309 ntBASIC11.52□□□□□ -0.57
Rif1Q6PR54 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm37922-201ENSMUST00000195596 455 ntBASIC11.51□□□□□ -0.57
Rif1Q6PR54 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm6458-201ENSMUST00000211573 635 ntBASIC11.51□□□□□ -0.57
Rif1Q6PR54 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.51□□□□□ -0.57
Rif1Q6PR54 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.51□□□□□ -0.57
Rif1Q6PR54 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rif1Q6PR54 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms